phylogenetics

K-Dense-AI/scientific-agent-skills/skills/phylogenetics

43.5k 0PythonData Analysis
PlatformClaude Code

Build and analyze phylogenetic trees using MAFFT (multiple alignment), IQ-TREE 2 (maximum likelihood), and FastTree (fast NJ/ML). Visualize with ETE3 or FigTree. For evolutionary analysis, microbial genomics, viral phylodynamics, protein family analysis, and molecular clock studies.

Claude Code

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